Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases

G+C percentage of nucleic acid sequences, calculating  2nd 

gaps in aligned sequences, removing 

Garnier Osguthorpe Robson algorithm (GOR I) 

garnier program (EMBOSS) 

GC content, plotting over sequences 

GCG-format databases 

geecee program (EMBOSS) 

GenBank

    flat files

        example 

        field definitions 

    locations  [See DDBJ/EMBL/GenBank location examples table]

genetic code 

    alternative flatworm mitochondrial code 

    alternative yeast nuclear code 

    ascidian mitochondrial code 

    bacterial code 

    blepharisma nuclear code 

    chlorophycean mitochondrial code 

    ciliate code 

    dasycladacean code 

    echinoderm code 

    euplotid nuclear code 

    flatworm mitochondrial code 

    hexamita nuclear code 

    invertebrate mitochondrial code 

    plant plastid code 

    scenedesmus obliquus mitochondrial code 

    standard 

    thraustochytrium mitochondrial code 

    trematode mitochondrial code 

    yeast mitochondrial code 

getorf program (EMBOSS) 

GOR I (Garnier Osguthorpe Robson algorithm) 

greater than sign (>), FASTA 

GRIBSKOV profiles, finding matches with sequences